| transferase activity, IEA | 885 genes |
| transport, IEA | 381 genes |
| transcription factor activity, IEA | 344 genes |
| transcription factor activity, TAS | 278 genes |
| transporter activity, IEA | 216 genes |
| Totivirus_coat, Totivirus coat protein | 181 genes |
| TolA, TolA protein. This family consists of several bacterial TolA proteins as well as two eukaryotic proteins of unknown function. Tol proteins are involved in the translocation of group A colicins. Colicins are bacterial protein toxins, whic | 177 genes |
| transcription from Pol II promoter, TAS | 136 genes |
| Target Candidates May 2005 B | 127 genes |
| Trypsin, Trypsin | 124 genes |
| Tsg101, Tumour susceptibility gene 101 protein (TSG101). This family consists of the eukaryotic tumour susceptibility gene 101 protein (TSG101). Altered transcripts of this gene have been detected in sporadic breast cancers and many other huma | 114 genes |
| transferase activity, transferring glycosyl groups, IEA | 108 genes |
| transcription factor activity, NAS | 106 genes |
| transport, TAS | 98 genes |
| trypsin activity, IEA | 94 genes |
| transcription coactivator activity, TAS | 90 genes |
| TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha). Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor II | 82 genes |
| transcription corepressor activity, TAS | 73 genes |
| transcription factor activity, NR | 69 genes |
| transporter activity, TAS | 62 genes |
| transcription, IEA | 56 genes |
| transmembrane receptor activity, IEA | 48 genes |
| TSP_1, Thrombospondin type 1 domain | 47 genes |
| Target Candidates Apr.2004 | 46 genes |
| TBC, TBC domain. Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases | 45 genes |
| transmembrane receptor activity, TAS | 45 genes |
| Tektin, Tektin family. Tektins are cytoskeletal proteins. They have been demonstrated in such cellular sites as centrioles, basal bodies, and along ciliary and flagellar doublet microtubules. Tektins form unique protofilaments, organised as lo | 43 genes |
| TGF_beta, Transforming growth factor beta like domain | 37 genes |
| TAS2R, Mammalian taste receptor protein (TAS2R). This family consists of several forms of mammalian taste receptor proteins (TAS2Rs). TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate | 37 genes |
| TT_ORF1, TT viral orf 1. TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals and numerous prevalence studies have raised questions | 35 genes |
| Thioredoxin, Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise | 34 genes |
| Tropomyosin, Tropomyosin | 34 genes |
| TFIIA, Transcription factor IIA, alpha/beta subunit. Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gam | 34 genes |
| Tetraspannin, Tetraspanin family | 33 genes |
| translation initiation factor activity, IEA | 32 genes |
| transcription from Pol II promoter, NR | 31 genes |
| Tubulin, Tubulin/FtsZ family, GTPase domain. This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming | 30 genes |
| transcriptional activator activity, NAS | 30 genes |
| TIG, IPT/TIG domain. This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA bin | 29 genes |
| transmembrane receptor protein tyrosine kinase signaling pathway, IEA | 28 genes |
| Tubulin_C, Tubulin/FtsZ family, C-terminal domain. This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-f | 27 genes |
| TAFII28, hTAFII28-like protein conserved region. The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the tra | 27 genes |
| tight junction, IEA | 26 genes |
| Target Candidates May 2005 A | 26 genes |
| TSP_N, Thrombospondin N-terminal -like domain | 25 genes |
| Trypan_PARP, Procyclic acidic repetitive protein (PARP). This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei e | 25 genes |
| TGFb_propeptide, TGF-beta propeptide. This propeptide is known as latency associated peptide (LAP) in TGF-beta. LAP is a homodimer which is disulfide linked to TGF-beta binding protein | 24 genes |
| transmembrane receptor protein tyrosine kinase signaling pathway, TAS | 22 genes |
| TIR, TIR domain. The TIR domain is an intracellular signaling domain found in MyD88, interleukin 1 receptor and the Toll receptor. Called TIR (by SMART?) for Toll - Interleukin - Resistance | 21 genes |
| Tropomodulin, Tropomodulin. Tropomodulin is a novel tropomyosin regulatory protein that binds to the end of erythrocyte tropomyosin and blocks head-to-tail association of tropomyosin along actin filaments. Limited proteolysis shows this protei | 21 genes |
| Tymo_45kd_70kd, Tymovirus 45/70Kd protein. Tymoviruses are single stranded RNA viruses. This family includes a protein of unknown function that has been named based on its molecular weight. Tymoviruses such as the ononis yellow mosaic tymoviru | 21 genes |
| tRNA processing, IEA | 21 genes |
| transferase activity, transferring hexosyl groups, IEA | 20 genes |
| TraB_pillus, TraB pilus assembly protein. This family consists of several bacterial TraB pilus assembly proteins. TraB is know to be essential for piliation and transfer but very little is known about its specific role in this process. It has | 19 genes |
| tubulin, IEA | 19 genes |
| transmembrane receptor protein tyrosine phosphatase activity, TAS | 18 genes |
| T-box, T-box. The T-box encodes a 180 amino acid domain that binds to DNA | 17 genes |
| transcription factor binding, TAS | 17 genes |
| Thyroglobulin_1, Thyroglobulin type-1 repeat. Thyroglobulin type 1 repeats are thought to be involved in the control of proteolytic degradation. The domain usually contains six conserved cysteines. These form three disulphide bridges. Cysteine | 16 genes |
| TNF, TNF(Tumour Necrosis Factor) family | 16 genes |
| Troponin, Troponin. Troponin (Tn) contains three subunits, Ca2+ binding (TnC), inhibitory (TnI), and tropomyosin binding (TnT). this Pfam contains members of the TnT subunit. Troponin is a complex of three proteins, Ca2+ binding (TnC), inhibit | 16 genes |
| tumor necrosis factor receptor binding, IEA | 16 genes |
| transporter activity, NR | 16 genes |
| tricarboxylic acid cycle, IEA | 16 genes |
| transcriptional activator activity, IDA | 16 genes |
| TACC, Transforming acidic coiled-coil-containing protein (TACC). This family contains the proteins TACC 1, 2 and 3 the genes for which are found concentrated in the centrosomes of eukaryotic and may play a conserved role in organising centroso | 15 genes |
| transcription initiation from Pol II promoter, TAS | 15 genes |
| translational initiation, IEA | 15 genes |
| transforming growth factor beta receptor signaling pathway, TAS | 15 genes |
| TUDOR, Tudor domain. Domain of unknown function present in several RNA-binding proteins. copies in the Drosophila Tudor protein | 14 genes |
| transcription cofactor activity, TAS | 14 genes |
| transmembrane receptor protein tyrosine kinase activity, TAS | 14 genes |
| transaminase activity, IEA | 14 genes |
| TPR, TPR Domain | 13 genes |
| transcription coactivator activity, NR | 13 genes |
| translation initiation factor activity, TAS | 13 genes |
| translation elongation factor activity, IEA | 13 genes |
| transmembrane receptor activity, NAS | 13 genes |
| transcription factor complex, IEA | 13 genes |
| transcriptional repressor activity, IDA | 13 genes |
| transcriptional repressor activity, NAS | 13 genes |
| TTL, Tubulin-tyrosine ligase family. Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensivel | 12 genes |
| TIP120, TBP (TATA-binding protein) -interacting protein 120 (TIP120). TIP120A is thought to be a unique global transcription factor that can interact with TBP and can stimulate all classes of eukaryotic transcription. TIP120B is specifically e | 12 genes |
| transport, NAS | 12 genes |
| transport, NR | 12 genes |
| transcription regulator activity, IEA | 12 genes |
| thyroid hormone receptor binding, IDA | 12 genes |
| tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T). Other tRNA synthetase sub-families are too dissimilar to be included. This domain is the core catalytic domain of tRNA synthetases and includes glycyl, histidyl, prolyl, se | 11 genes |
| Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around con | 11 genes |
| THAP, THAP domain. This THAP domain is a putative DNA-binding domain with a C2CH architecture that probably binds a zinc ion | 11 genes |
| two-component signal transduction system (phosphorelay), IEA | 11 genes |
| transcription factor TFIID complex, TAS | 11 genes |
| transcription, TAS | 11 genes |
| transcription initiation, IEA | 11 genes |
| translational elongation, IEA | 11 genes |
| taste receptor activity, TAS | 11 genes |
| ThiF, ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family | 10 genes |
| Thi4, Thi4 family. This family includes a putative thiamine biosynthetic enzyme | 10 genes |
| Ten_N, Teneurin Intracellular Region. This family is found in the intracellular N-terminal region of the Teneurin family of proteins. These proteins are 'pair-rule' genes and are involved in tissue patterning, specifically probably neural patt | 10 genes |
| two-component sensor molecule activity, IEA | 10 genes |
| transforming growth factor beta receptor activity, IEA | 10 genes |
| transcription, NAS | 10 genes |
| transcription initiation from Pol II promoter, IDA | 10 genes |
| transcription from Pol III promoter, TAS | 10 genes |
| transcriptional activator activity, IEA | 10 genes |
| TNFR_c6, TNFR/NGFR cysteine-rich region | 9 genes |
| Transglut_N, Transglutaminase family | 9 genes |
| Transglut_C, Transglutaminase family, C-terminal ig like domain | 9 genes |
| T-cell activation, NAS | 9 genes |
| Trefoil, Trefoil (P-type) domain | 8 genes |
| tRNA-synt_1, tRNA synthetases class I (I, L, M and V). Other tRNA synthetase sub-families are too dissimilar to be included | 8 genes |
| Transket_pyr, Transketolase, pyridine binding domain. This family includes transketolase enzymes, pyruvate dehydrogenases, and branched chain alpha-keto acid decarboxylases | 8 genes |
| TFA, Transcription elongation factor A, SII-related family. The function of this family is unclear, but some members are described as transcription elongation factor A, SII-like proteins | 8 genes |
| Transformer, Fruit fly transformer protein. This family consists of transformer proteins from several Drosophila species and also from Ceratitis capitata (Mediterranean fruit fly). The transformer locus (tra) produces an RNA processing protein | 8 genes |
| transcription factor activity, ISS | 8 genes |
| tubulin-tyrosine ligase activity, IEA | 8 genes |
| tight junction, TAS | 8 genes |
| transcriptional activator activity, TAS | 8 genes |
| Thiolase_N, Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase | 7 genes |
| Tissue_fac, Tissue factor | 7 genes |
| TEA, TEA/ATTS domain family | 7 genes |
| tRNA_anti, OB-fold nucleic acid binding domain. This family contains OB-fold domains that bind to nucleic acids. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See pfam00152). Aminoacyl | 7 genes |
| Thiolase_C, Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase | 7 genes |
| Triadin, Triadin. This family consists of several eukaryotic triadin proteins. Triadin is a ryanodine receptor and calsequestrin binding protein located in junctional sarcoplasmic reticulum of striated muscles | 7 genes |
| tRNA binding, TAS | 7 genes |
| transcription coactivator activity, NAS | 7 genes |
| transcription factor complex, TAS | 7 genes |
| transmembrane receptor protein tyrosine kinase signaling pathway, NAS | 7 genes |
| transcriptional activator activity, ISS | 7 genes |
| tRNA-synt_2, tRNA synthetases class II (D, K and N). Other tRNA synthetase sub-families are too dissimilar to be included | 6 genes |
| TB, TB domain. This domain is also known as the 8 cysteine domain. This family includes the hybrid domains. This cysteine rich repeat is found in TGF binding protein and fibrillin | 6 genes |
| Thioesterase, Thioesterase domain. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to | 6 genes |
| TB2_DP1_HVA22, TB2/DP1, HVA22 family. This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an auto | 6 genes |
| Tctex-1, Tctex-1 family. Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction | 6 genes |
| TFR_dimer, Transferrin receptor-like dimerisation domain. This domain is involved in dimerisation of the transferrin receptor as shown in its crystal structure | 6 genes |
| TelA, Toxic anion resistance protein (TelA). This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition | 6 genes |
| Torsin, Torsin. This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-on | 6 genes |
| transcription factor activity, IDA | 6 genes |
| transcription cofactor activity, IDA | 6 genes |
| translation initiation factor activity, NAS | 6 genes |
| transmembrane receptor protein tyrosine kinase activity, IEA | 6 genes |
| tRNA ligase activity, IEA | 6 genes |
| tumor necrosis factor receptor activity, TAS | 6 genes |
| transcription initiation from Pol II promoter, IEA | 6 genes |
| telomerase-dependent telomere maintenance, IEA | 6 genes |
| telomerase-dependent telomere maintenance, TAS | 6 genes |
| transmembrane receptor protein tyrosine phosphatase signaling pathway, TAS | 6 genes |
| transcriptional repressor activity, IEA | 6 genes |
| transcriptional repressor activity, ISS | 6 genes |
| transcriptional repressor activity, TAS | 6 genes |
| transferase activity, transferring phosphorus-containing groups, IEA | 6 genes |
| transcription initiation factor activity, IEA | 6 genes |
| T-cell receptor complex, NAS | 6 genes |
| TIM, Triosephosphate isomerase | 5 genes |
| tRNA-synt_1b, tRNA synthetases class I (W and Y) | 5 genes |
| TCTP, Translationally controlled tumour protein | 5 genes |
| TFIIS, Transcription factor S-II (TFIIS) | 5 genes |
| Tub, Tub family | 5 genes |
| tRNA-synt_2c, tRNA synthetases class II (A). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases | 5 genes |
| TIL, Trypsin Inhibitor like cysteine rich domain. This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cystei | 5 genes |
| TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD | 5 genes |
| Tim17, Tim17/Tim22/Tim23 family. The pre-protein translocase of the mitochondrial outer membrane (Tom) allows the import of pre-proteins from the cytoplasm. Tom forms a complex with a number of proteins, including Tim17. Tim17 and Tim23 are th | 5 genes |
| Transketolase_C, Transketolase, C-terminal domain. The C-terminal domain of transketolase has been proposed as a regulatory molecule binding site | 5 genes |
| TGS, TGS domain. The TGS domain is named after ThrRS, GTPase, and SpoT. Interestingly, TGS domain was detected also at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the | 5 genes |
| Transposase_22, L1 transposable element | 5 genes |
| TF_AP-2, Transcription factor AP-2 | 5 genes |
| TLE_N, Groucho/TLE N-terminal Q-rich domain. The N-terminal domain of the Grouch/TLE co-repressor proteins are involved in oligomerisation | 5 genes |
| TSP_C, Thrombospondin C-terminal region. This region is found at the C-terminus of thrombospondin and related proteins | 5 genes |
| triacylglycerol lipase activity, IEA | 5 genes |
| transmembrane-ephrin receptor activity, TAS | 5 genes |
| traversing start control point of mitotic cell cycle, TAS | 5 genes |
| transmembrane receptor protein serine/threonine kinase signaling pathway, TAS | 5 genes |
| tRNA processing, TAS | 5 genes |
| tetracycline:hydrogen antiporter activity, IEA | 5 genes |
| type III site-specific deoxyribonuclease activity, IEA | 5 genes |
| tetracycline transport, IEA | 5 genes |
| TLV_coat, ENV polyprotein (coat polyprotein) | 4 genes |
| Transketolase_N, Transketolase, thiamine diphosphate binding domain. This family includes transketolase enzymes EC:2.2.1.1. and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit EC:1.2.4.4. Both these enzymes utilise thiami | 4 genes |
| TIMP, Tissue inhibitor of metalloproteinase. Members of this family are common in extracellular regions of vertebrate species | 4 genes |
| TYA, TYA transposon protein. Ty are yeast transposons. A 5.7kb transcript codes for p3 a fusion protein of TYA and TYB. The TYA protein is analogous to the gag protein of retroviruses. TYA a is cleaved to form 46kd protein which can form matur | 4 genes |
| TatD_DNase, TatD related DNase. This family of proteins are related to a large superfamily of metalloenzymes. TatD, a member of this family has been shown experimentally to be a DNase enzyme | 4 genes |
| TSC22, TSC-22/dip/bun family | 4 genes |
| tRNA-synt_1e, tRNA synthetases class I (C) catalytic domain. This family includes only cysteinyl tRNA synthetases | 4 genes |
| Thymidylate_kin, Thymidylate kinase | 4 genes |
| TBCA, Tubulin binding cofactor A | 4 genes |
| tRNA_Me_trans, tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble p | 4 genes |
| TMS_TDE, TMS membrane protein/tumour differentially expressed protein (TDE) | 4 genes |
| TRAP_alpha, Translocon-associated protein (TRAP), alpha subunit. The alpha-subunit of the TRAP complex (TRAP alpha) is a single-spanning membrane protein of the endoplasmic reticulum (ER) which is found in proximity of nascent polypeptide chai | 4 genes |
| TRAPP_Bet3, Transport protein particle (TRAPP) component, Bet3. TRAPP plays a key role in the targeting and/or fusion of ER-to-Golgi transport vesicles with their acceptor compartment. TRAPP is an 800 KDa that contains at least 10 subunits | 4 genes |
| Tht1, Tht1-like nuclear fusion protein | 4 genes |
| TPD52, Tumour protein D52 family. The hD52 gene was originally identified through its elevated expression level in human breast carcinoma. Cloning of D52 homologues from other species has indicated that D52 may play roles in calcium-mediated s | 4 genes |
| Tweety, Tweety. The tweety (tty) gene has not been characterised at the protein level. However, it is thought to form a membrane protein with five potential membrane-spanning regions. A number of potential functions have been suggested in | 4 genes |
| translation release factor activity, IEA | 4 genes |
| triacylglycerol lipase activity, TAS | 4 genes |
| thyroid hormone receptor activity, TAS | 4 genes |
| thromboxane receptor activity, IEA | 4 genes |
| transmembrane receptor protein tyrosine kinase adaptor protein activity, TAS | 4 genes |
| transporter activity, NAS | 4 genes |
| telomerase holoenzyme complex, IDA | 4 genes |
| transcription from Pol I promoter, TAS | 4 genes |
| tRNA splicing, IEA | 4 genes |
| translational elongation, NAS | 4 genes |
| translational elongation, TAS | 4 genes |
| translational termination, IEA | 4 genes |
| tRNA aminoacylation for protein translation, IEA | 4 genes |
| tachykinin signaling pathway, TAS | 4 genes |
| tRNA processing, NAS | 4 genes |
| transcription factor binding, IPI | 4 genes |
| transcription factor binding, ISS | 4 genes |
| translation factor activity, nucleic acid binding, TAS | 4 genes |
| thiol-disulfide exchange intermediate activity, TAS | 4 genes |
| transcription regulator activity, NAS | 4 genes |
| T-cell activation, TAS | 4 genes |
| trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity, IEA | 4 genes |
| Tyrosinase, Common central domain of tyrosinase. This family also contains polyphenol oxidases and some hemocyanins. Binds two copper ions via two sets of three histidines. This family is related to pfam00372 | 3 genes |
| TBP, Transcription factor TFIID (or TATA-binding protein, TBP) | 3 genes |
| Transferrin, Transferrin | 3 genes |
| Tubulin-binding, Tau and MAP protein, tubulin-binding repeat | 3 genes |
| THF_DHG_CYH, Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain | 3 genes |
| T4_deiodinase, Iodothyronine deiodinase | 3 genes |
| TruB_N, TruB family pseudouridylate synthase (N terminal domain). Members of this family are involved in modifying bases in RNA molecules. They carry out the conversion of uracil bases to pseudouridine. This family includes TruB, a pseudouridy | 3 genes |
| THF_DHG_CYH_C, Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain | 3 genes |
| THUMP, THUMP domain. The THUMP domain is named after after thiouridine synthases, methylases and PSUSs. The THUMP domain consists of about 110 amino acid residues. It is predicted that this domain is an RNA-binding domain that adopts an alpha/ | 3 genes |
| Treacle, Treacher Collins syndrome protein Treacle | 3 genes |
| tRNA_m1G_MT_9, tRNA m(1)G methyltransferase. Family member HYNA is the product of a novel gene expressed in human liver cancer tissue. This methyltransferase is responsible for methylation of tRNA at the N-1 position of guanosine to form m(1)G | 3 genes |
| TIMELESS_C, Timeless protein C terminal region. The timeless (tim) gene is essential for circadian function in Drosophila. Putative homologues of Drosophila tim have been identified in both mice and humans (mTim and hTIM, respectively). Mammal | 3 genes |
| TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts | 3 genes |
| tRNA-synt_1d_C, DALR anticodon binding domain. This all alpha helical domain is the anticodon binding domain in Arginyl and glycyl tRNA synthetase. This domain is known as the DALR domain after characteristic conserved amino acids | 3 genes |
| Tcp11, T-complex protein 11. This family consists of several eukaryotic T-complex protein 11 (Tcp11) related sequences. Tcp11 is only expressed in fertile adult mammalian testes and is thought to be important in sperm function and fertility. T | 3 genes |
| Tcp10_C, T-complex protein 10 C-terminus. This family represents the C-terminus (approximately 180 residues) of eukaryotic T-complex protein 10. The T-complex is involved in spermatogenesis in mice | 3 genes |
| tRNA binding, IEA | 3 genes |
| tRNA-intron endonuclease activity, IEA | 3 genes |
| tRNA-intron endonuclease complex, IEA | 3 genes |
| transcription corepressor activity, NAS | 3 genes |
| transcription corepressor activity, NR | 3 genes |
| telomerase activity, IDA | 3 genes |
| translation elongation factor activity, NAS | 3 genes |
| threonine-tRNA ligase activity, IEA | 3 genes |
| type 1 serine/threonine specific protein phosphatase inhibitor activity, TAS | 3 genes |
| transmembrane receptor activity, ISS | 3 genes |
| tachykinin receptor activity, TAS | 3 genes |
| tropomyosin binding, IEA | 3 genes |
| tropomyosin binding, TAS | 3 genes |
| transcription factor TFIID complex, IEA | 3 genes |
| transcription factor TFIIH complex, TAS | 3 genes |
| troponin complex, NR | 3 genes |
| tight junction, ISS | 3 genes |
| tight junction, NR | 3 genes |
| tricarboxylic acid cycle, NR | 3 genes |
| transcription-coupled nucleotide-excision repair, IDA | 3 genes |
| transcription, DNA-dependent, NAS | 3 genes |
| translational initiation, NAS | 3 genes |
| translational initiation, TAS | 3 genes |
| threonyl-tRNA aminoacylation, IEA | 3 genes |
| telomerase-dependent telomere maintenance, NAS | 3 genes |
| transmembrane receptor protein serine/threonine kinase signaling pathway, IEA | 3 genes |
| transforming growth factor beta receptor complex assembly, TAS | 3 genes |
| tyrosine phosphorylation of STAT protein, TAS | 3 genes |
| transcription elongation factor complex, TAS | 3 genes |
| thrombin receptor activity, TAS | 3 genes |
| transmembrane receptor protein tyrosine kinase activator activity, NAS | 3 genes |
| T-helper 2 type immune response, TAS | 3 genes |
| T-cell activation, ISS | 3 genes |
| telomeric DNA binding, TAS | 3 genes |
| thyroid hormone receptor binding, NAS | 3 genes |
| thyroid hormone receptor binding, TAS | 3 genes |
| TPP_enzyme_M, Thiamine pyrophosphate enzyme, central domain. The central domain of TPP enzymes contains a 2-fold Rossman fold | 2 genes |
| TFIIB, Transcription factor TFIIB repeat | 2 genes |
| Transthyretin, Transthyretin precursor (formerly prealbumin). Transthyretin is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain. Mutations in the human transthyretin are associated with several gene | 2 genes |
| tRNA-synt_1c, tRNA synthetases class I (E and Q), catalytic domain. Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a single glutamyl- | 2 genes |
| tRNA-synt_1d, tRNA synthetases class I (R). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only arginyl tRNA synthetase | 2 genes |
| Topoisom_I, Eukaryotic DNA topoisomerase I, catalytic core. Topoisomerase I promotes the relaxation of DNA superhelical tension by introducing a transient single-stranded break in duplex DNA and are vital for the processes of replication, tran | 2 genes |
| Topoisom_bac, DNA topoisomerase. This subfamily of topoisomerase is divided on the basis that these enzymes preferentially relax negatively supercoiled DNA, from a 5' phospho- tyrosine linkage in the enzyme-DNA covalent intermediate and has hi | 2 genes |
| tRNA-synt_2d, tRNA synthetases class II core domain (F). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain | 2 genes |
| tRNA_bind, Putative tRNA binding domain. This domain is found in prokaryotic methionyl-tRNA synthetases, prokaryotic phenylalanyl tRNA synthetases the yeast GU4 nucleic-binding protein (G4p1 or p42, ARC1), human tyrosyl-tRNA synthetase, and en | 2 genes |
| Transposase_12, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165 | 2 genes |
| TGT, Queuine tRNA-ribosyltransferase. This is a family of queuine tRNA-ribosyltransferases EC:2.4.2.29, also known as tRNA-guanine transglycosylase and guanine insertion enzyme. Queuine tRNA-ribosyltransferase modifies tRNAs for asparagine, as | 2 genes |
| TCL1_MTCP1, TCL1/MTCP1 family. Two related oncogenes, TCL-1 and MTCP-1, are overexpressed in T cell prolymphocytic leukaemias as a result of chromosomal rearrangements that involve the translocation of one T cell receptor gene to either chromo | 2 genes |
| tRNA_int_endo, tRNA intron endonuclease, catalytic C-terminal domain. Members of this family cleave pre tRNA at the 5' and 3' splice sites to release the intron EC:3.1.27.9 | 2 genes |
| Translin, Translin family. Members of this family include Translin, which interacts with DNA and forms a ring around the DNA. This family also includes, which was found to interact with translin with yeast two-hybrid screen | 2 genes |
| TRM, N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytopla | 2 genes |
| TFIID-31kDa, Transcription initiation factor IID, 31kD subunit. This family represents the N-terminus of the 31kD subunit (42kD in drosophila) of transcription initiation factor IID (TAFII31). TAFII31 binds to p53, and is an essential requirem | 2 genes |
| Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylase. This family comprises of several D-Tyr-tRNA(Tyr) deacylase proteins. Cell growth inhibition by several d-amino acids can be explained by an in vivo production of d-aminoacyl-tRNA molecules. Escherichia | 2 genes |
| TPP_enzyme_N, Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 2 genes |
| Topoisom_I_N, Eukaryotic DNA topoisomerase I, DNA binding fragment. Topoisomerase I promotes the relaxation of DNA superhelical tension by introducing a transient single-stranded break in duplex DNA and are vital for the processes of replicati | 2 genes |
| TAF, TATA box binding protein associated factor (TAF). TAF proteins adopt a histone-like fold | 2 genes |
| TspO_MBR, TspO/MBR family. Tryptophan-rich sensory protein (TspO) is an integral membrane protein that acts as a negative regulator of the expression of specific photosynthesis genes in response to oxygen/light. It is involved in the efflux of | 2 genes |
| Trp_Tyr_perm, Tryptophan/tyrosine permease family | 2 genes |
| TSA, Type specific antigen. There are several antigenic variants in Rickettsia tsutsugamushi, and a type-specific antigen (TSA) of 56-kilodaltons located on the rickettsial surface is responsible for the variation. TSA proteins are probably in | 2 genes |
| TF_Otx, Otx1 transcription factor | 2 genes |
| TAP_C, TAP C-terminal domain. The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for nuclear export of mRNA. Tap has a modular structure, and its most C-terminal domain is important for binding to FG repe | 2 genes |
| tRNA-synt_1c_C, tRNA synthetases class I (E and Q), anti-codon binding domain. Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only glutamyl and glutaminyl tRNA synthetases. In some organisms, a singl | 2 genes |
| Tim44, Tim44-like domain. Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane. Tim44 is thought to bind phospholipids of the mitochondrial inner m | 2 genes |
| Tom22, Mitochondrial import receptor subunit Tom22. The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded preproteins into mitochondria, is very complex with at least 19 components. These proteins i | 2 genes |
| TFIID_90kDa, WD40 associated region in TFIID subunit. This region, possibly a domain is found in subunits of transcription factor TFIID. The function of this region is unknown | 2 genes |
| Tis11B_C, Tis11B like protein, C terminus. Members of this family always contain a tandem repeat of CCCH zinc fingers pfam00642. Tis11B, Tis11D and their homologues are thought to be regulatory proteins involved in the response to growth facto | 2 genes |
| TAFII55_N, TAFII55 protein conserved region. The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcr | 2 genes |
| TAF4, Transcription initiation factor TFIID component TAF4 family. This region of similarity is found in Transcription initiation factor TFIID component TAF4 | 2 genes |
| TMEM9, TMEM9. This family contains several eukaryotic transmembrane proteins which are homologous to human transmembrane protein 9. The TMEM9 gene encodes a 183 amino-acid protein that contains an N-terminal signal peptide, a single transmembr | 2 genes |
| Trigger_C, Bacterial trigger factor protein (TF) C-terminus. In the E. coli cytosol, a fraction of the newly synthesised proteins requires the activity of molecular chaperones for folding to the native state. The major chaperones implicated in | 2 genes |
| TPMT, Thiopurine S-methyltransferase (TPMT). This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of arom | 2 genes |
| TROVE, TROVE domain. This presumed domain is found in TEP1 and Ro60 proteins, that are RNA-binding components of Telomerase, Ro and Vault RNPs. This domain has been named TROVE, (after Telomerase, Ro and Vault). This domain is probably RNA-bin | 2 genes |
| tRNA_U5-meth_tr, tRNA (Uracil-5-)-methyltransferase. This family consists of (Uracil-5-)-methyltransferases EC:2.1.1.35 from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial | 2 genes |
| TIP49, TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebra | 2 genes |
| TRAP_240kDa, TRAP240. Members of this family have been shown to be involved in transcriptional repression via the Mediator complex | 2 genes |
| TRI12, Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within | 2 genes |
| transcription factor TFIIIC complex, TAS | 2 genes |
| transcriptional elongation regulator activity, NR | 2 genes |
| transcriptional elongation regulator activity, TAS | 2 genes |
| transcription cofactor activity, IEA | 2 genes |
| transcription cofactor activity, NR | 2 genes |
| transcription coactivator activity, IDA | 2 genes |
| transcription corepressor activity, ISS | 2 genes |
| thrombin activity, IEA | 2 genes |
| tissue kallikrein activity, NAS | 2 genes |
| tissue kallikrein activity, TAS | 2 genes |
| trypsin activity, TAS | 2 genes |
| thioredoxin-disulfide reductase activity, ISS | 2 genes |
| thiosulfate sulfurtransferase activity, TAS | 2 genes |
| thymidine kinase activity, TAS | 2 genes |
| transketolase activity, TAS | 2 genes |
| transposase activity, TAS | 2 genes |
| tRNA (guanine-N2-)-methyltransferase activity, IEA | 2 genes |
| tryptophan-tRNA ligase activity, IEA | 2 genes |
| thyroid-stimulating hormone receptor activity, TAS | 2 genes |
| transferrin receptor activity, NAS | 2 genes |
| tumor necrosis factor receptor activity, NAS | 2 genes |
| Toll binding, NAS | 2 genes |
| transforming growth factor beta receptor binding, IEA | 2 genes |
| transforming growth factor beta receptor binding, NR | 2 genes |
| transforming growth factor beta receptor binding, TAS | 2 genes |
| tumor necrosis factor receptor binding, NAS | 2 genes |
| tropomyosin binding, NAS | 2 genes |
| tropomyosin binding, NR | 2 genes |
| transcription factor complex, ISS | 2 genes |
| transcription factor TFIIE complex, NR | 2 genes |
| transcription factor TFIIH complex, NAS | 2 genes |
| tight junction, IDA | 2 genes |
| tricarboxylic acid cycle, TAS | 2 genes |
| thioredoxin pathway, NAS | 2 genes |
| transcription, IDA | 2 genes |
| transcription, DNA-dependent, TAS | 2 genes |
| transcription initiation from Pol II promoter, ISS | 2 genes |
| transcription from Pol III promoter, NR | 2 genes |
| transcription initiation from Pol III promoter, TAS | 2 genes |
| tryptophanyl-tRNA aminoacylation, IEA | 2 genes |
| tyrosine catabolism, TAS | 2 genes |
| thyroid hormone generation, IEA | 2 genes |
| thyroid hormone generation, TAS | 2 genes |
| triacylglycerol metabolism, TAS | 2 genes |
| tetrahydrobiopterin biosynthesis, IEA | 2 genes |
| thiamin metabolism, TAS | 2 genes |
| transmembrane receptor protein tyrosine kinase ligand binding, NAS | 2 genes |
| transmembrane receptor protein tyrosine kinase activation (dimerization), ISS | 2 genes |
| transforming growth factor beta receptor signaling pathway, NAS | 2 genes |
| transforming growth factor beta receptor signaling pathway, NR | 2 genes |
| thioredoxin peroxidase activity, TAS | 2 genes |
| thrombin receptor activity, IEA | 2 genes |
| tubulin binding, ISS | 2 genes |
| tubulin binding, TAS | 2 genes |
| transcription initiation factor activity, NAS | 2 genes |
| transmission of nerve impulse, IEP | 2 genes |
| tryptase activity, IEA | 2 genes |
| transport vesicle, TAS | 2 genes |
| T-cell differentiation, NAS | 2 genes |
| transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity, TAS | 2 genes |
| T-cell activation, IC | 2 genes |
| T-cell receptor binding, NAS | 2 genes |
| tubulin, ISS | 2 genes |
| tubulin, NAS | 2 genes |
| TRAIL binding, NAS | 2 genes |
| TK, Thymidine kinase | 1 genes |
| Thymidylat_synt, Thymidylate synthase | 1 genes |
| TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases. This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Di | 1 genes |
| Transaldolase, Transaldolase | 1 genes |
| TruD, tRNA pseudouridine synthase D (TruD). TruD is responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs | 1 genes |
| Trehalase, Trehalase | 1 genes |
| TP2, Nuclear transition protein 2 | 1 genes |
| Transposase_1, Transposase. This family includes the mariner transposase | 1 genes |
| Toprim, Toprim domain. This is a conserved region from DNA primase. This corresponds to the Toprim domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR proteins. Both DnaG motifs IV and V are present in the alignment, | 1 genes |
| TRAM, TRAM domain. This small domain has no known function. However it may perform a nucleic acid binding role | 1 genes |
| TraB, TraB family. pAD1 is a hemolysin/bacteriocin plasmid originally identified in Enterococcus faecalis DS16. It encodes a mating response to a peptide sex pheromone, cAD1, secreted by recipient bacteria. Once the plasmid pAD1 is acquired, p | 1 genes |
| TFIIE_alpha, TFIIE alpha subunit. The general transcription factor TFIIE has an essential role in eukaryotic transcription initiation together with RNA polymerase II and other general factors. Human TFIIE consists of two subunits, TFIIE-alpha | 1 genes |
| TFIIE_beta, TFIIE beta subunit core domain. General transcription factor TFIIE consists of two subunits, TFIIE alpha pfam02002 and TFIIE beta. TFIIE beta has been found to bind to the region where the promoter starts to open to be single-stran | 1 genes |
| TFIIA_gamma_N, Transcription initiation factor IIA, gamma subunit, helical domain. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor | 1 genes |
| TFIID-18kDa, Transcription initiation factor IID, 18kD subunit. This family includes the Spt3 yeast transcription factors and the 18kD subunit from human transcription initiation factor IID (TFIID-18). Determination of the crystal structure re | 1 genes |
| TFIIF_beta, Transcription initiation factor IIF, beta subunit. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIF (TFIIF) is a te | 1 genes |
| Telo_bind_N, Telomere-binding protein alpha subunit, N-terminal domain. The telomere-binding protein forms a heterodimer in ciliates consisting of an alpha and a beta subunit. This complex may function as a protective cap for the single-strand | 1 genes |
| TIL_assoc, TILa domain. This cysteine rich domain occurs along side the TIL pfam01826 domain and is likely to be a distantly related relative. This domain is found five to twenty-five times in zonadhesins. The TILa domain is also found twice i | 1 genes |
| ThiI, Thiamine biosynthesis protein (ThiI). ThiI is required for thiazole synthesis, required for thiamine biosynthesis | 1 genes |
| ThiS, ThiS family. ThiS (thiaminS) is a 66 aa protein involved in sulphur transfer. ThiS is coded in the thiCEFSGH operon in E. coli. This family of proteins have two conserved Glycines at the COOH terminus. Thiocarboxylate is formed at the la | 1 genes |
| TFIIA_gamma_C, Transcription initiation factor IIA, gamma subunit, beta-barrel domain. Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation fa | 1 genes |
| Trp_dioxygenase, Tryptophan 2,3-dioxygenase | 1 genes |
| TATR, Trans-activating transcriptional regulator. This family of trans-activating transcriptional regulator (TATR), also known as intermediate early protein 1, are common to the Nucleopolyhedroviruses | 1 genes |
| TFIID_30kDa, Transcription initiation factor TFIID 23-30kDa subunit | 1 genes |
| Tuberin, Tuberin. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 | 1 genes |
| TFIID_20kDa, Transcription initiation factor TFIID subunit A | 1 genes |
| Tfb2, Transcription factor Tfb2 | 1 genes |
| Tfb4, Transcription factor Tfb4 | 1 genes |
| TPR_div1, TPR repeat region. This family represents a set of three divergent TPR repeats found in a small group of uncharacterised proteins | 1 genes |
| TIP41, TIP41-like family. The TOR signalling pathway activates a cell-growth program in response to nutrients. TIP41 interacts with TAP42 and negatively regulates the TOR signaling pathway | 1 genes |
| TAP42, TAP42-like family. The TOR signalling pathway activates a cell-growth program in response to nutrients. TIP41 (pfam04176) interacts with TAP42 and negatively regulates the TOR signaling pathway | 1 genes |
| TPK_catalytic, Thiamin pyrophosphokinase, catalytic domain. Family of thiamin pyrophosphokinase (EC:2.7.6.2). Thiamin pyrophosphokinase (TPK) catalyses the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme | 1 genes |
| TPK_B1_binding, Thiamin pyrophosphokinase, vitamin B1 binding domain. Family of thiamin pyrophosphokinase (EC:2.7.6.2). Thiamin pyrophosphokinase (TPK) catalyses the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form th | 1 genes |
| TP6A_N, Type IIB DNA topoisomerase. Type II DNA topoisomerases are ubiquitous enzymes that catalyse the ATP-dependent transport of one DNA duplex through a second DNA segment via a transient double-strand break. Type II DNA topoisomerases are | 1 genes |
| tRNA_synt_1c_R2, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2. This is a region found N terminal to the catalytic domain of glutaminyl-tRNA synthetase (EC 6.1.1.18) in eukaryotes but not in Escherichia coli. This region i | 1 genes |
| tRNA_synt_1c_R1, Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1. This is a region found N terminal to the catalytic domain of glutaminyl-tRNA synthetase (EC 6.1.1.18) in eukaryotes but not in Escherichia coli. This region i | 1 genes |
| Tsg, Twisted gastrulation (Tsg) protein conserved region. Tsg was identified in Drosophila as being required to specify the dorsal-most structures in the embryo, for example amnioserosa. Biochemical experiments have revealed three key properti | 1 genes |
| Transposase_30, Bacillus transposase protein. This family of putative transposases includes mostly Bacillus members. However, we have also found a Bacillus subtilis bacteriophage SPbetac2 homologue, possibly arising as a result of horizontal t | 1 genes |
| TIMELESS, Timeless protein. The timeless gene in Drosophila melanogaster and its homologues in a number of other insects and mammals (including human) are involved in circadian rhythm control. This family includes a related proteins from a num | 1 genes |
| TH1, TH1 protein. TH1 is a highly conserved but uncharacterised metazoan protein. No homologue has been identified in Caenorhabditis elegans. TH1 binds specifically to A-Raf kinase | 1 genes |
| TEP1_N, TEP1 N-terminal domain. This short sequence region is found in four copies at the N-terminus of the TEP1 telomerase component. The functional significance of the region is uncertain. However the conservation of two histidines and a cys | 1 genes |
| TRAP-delta, Translocon-associated protein, delta subunit precursor (TRAP-delta). This family consists of several eukaryotic translocon-associated protein, delta subunit precursors (TRAP-delta or SSR-delta). The exact function of this protein i | 1 genes |
| TRH, Thyrotropin-releasing hormone (TRH). This family consists of several thyrotropin-releasing hormone (TRH) proteins. Thyrotropin-Releasing Hormone (TRH; pyroGlu-His-Pro-NH2), originally isolated as a hypothalamic neuropeptide hormone, most | 1 genes |
| TRAP_beta, Translocon-associated protein beta (TRAPB). This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins. The normal translocation of nascent poly | 1 genes |
| Tyr-DNA_phospho, Tyrosyl-DNA phosphodiesterase. Covalent intermediates between topoisomerase I and DNA can become dead-end complexes that lead to cell death. Tyrosyl-DNA phosphodiesterase can hydrolyse the bond between topoisomerase I and DNA | 1 genes |
| TPX2, Targeting protein for Xklp2 (TPX2). This family represents a conserved region approximately 60 residues long within the eukaryotic targeting protein for Xklp2 (TPX2). Xklp2 is a kinesin-like protein localised on centrosomes throughout th | 1 genes |
| TRAP-gamma, Translocon-associated protein, gamma subunit (TRAP-gamma). This family consists of several eukaryotic translocon-associated protein, gamma subunit (TRAP-gamma) sequences. The translocation site (translocon), at which nascent polype | 1 genes |
| TBPIP, Tat binding protein 1(TBP-1)-interacting protein (TBPIP). This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences. TBP-1 has been demonstrated to interact with the human immunodeficiency virus type 1 (HIV- | 1 genes |
| tRNA binding, IDA | 1 genes |
| tRNA binding, ISS | 1 genes |
| tRNA binding, NAS | 1 genes |
| transcription factor TFIIIB complex, NAS | 1 genes |
| two-component signal transduction system (phosphorelay), NAS | 1 genes |
| telomere maintenance, TAS | 1 genes |
| translation repressor activity, nucleic acid binding, ISS | 1 genes |
| translation repressor activity, nucleic acid binding, NAS | 1 genes |
| thermoregulation, ISS | 1 genes |
| transcription factor activity, IMP | 1 genes |
| transcriptional elongation regulator activity, IEA | 1 genes |
| transcriptional elongation regulator activity, NAS | 1 genes |
| transcription cofactor activity, IPI | 1 genes |
| transcription cofactor activity, ISS | 1 genes |
| transcription coactivator activity, IEA | 1 genes |
| transcription coactivator activity, IMP | 1 genes |
| transcription corepressor activity, IDA | 1 genes |
| transcription termination factor activity, NAS | 1 genes |
| transcription termination factor activity, TAS | 1 genes |
| telomeric template RNA reverse transcriptase activity, IEA | 1 genes |
| telomeric template RNA reverse transcriptase activity, TAS | 1 genes |
| translation initiation factor activity, IDA | 1 genes |
| translation initiation factor activity, ISS | 1 genes |
| translation elongation factor activity, NR | 1 genes |
| translation elongation factor activity, TAS | 1 genes |
| translation release factor activity, TAS | 1 genes |
| thrombin activity, IDA | 1 genes |
| tripeptidyl-peptidase II activity, TAS | 1 genes |
| trypsin activity, NAS | 1 genes |
| tetrahydrofolylpolyglutamate synthase activity, TAS | 1 genes |
| tryptophan 5-monooxygenase activity, IEA | 1 genes |
| tyrosine 3-monooxygenase activity, IEA | 1 genes |
| tyrosine 3-monooxygenase activity, TAS | 1 genes |
| transmembrane receptor protein tyrosine kinase activity, IDA | 1 genes |
| transmembrane receptor protein tyrosine kinase activity, NAS | 1 genes |
| thiamin diphosphokinase activity, IEA | 1 genes |
| thioredoxin-disulfide reductase activity, IDA | 1 genes |
| thioredoxin-disulfide reductase activity, NAS | 1 genes |
| thioredoxin-disulfide reductase activity, TAS | 1 genes |
| threonine synthase activity, IEA | 1 genes |
| thromboxane-A synthase activity, IEA | 1 genes |
| thymidylate kinase activity, TAS | 1 genes |
| thymidylate synthase activity, IEA | 1 genes |
| thyroxine 5'-deiodinase activity, IEA | 1 genes |
| thyroxine 5'-deiodinase activity, NAS | 1 genes |
| thyroxine 5'-deiodinase activity, TAS | 1 genes |
| transaldolase activity, IEA | 1 genes |
| transaldolase activity, TAS | 1 genes |
| triacylglycerol lipase activity, NAS | 1 genes |
| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, NAS | 1 genes |
| tRNA adenylyltransferase activity, IDA | 1 genes |
| tRNA isopentenyltransferase activity, TAS | 1 genes |
| tryptophan-tRNA ligase activity, NR | 1 genes |
| tyrosine-tRNA ligase activity, IEA | 1 genes |
| tyrosine-tRNA ligase activity, TAS | 1 genes |
| tryptophan 2,3-dioxygenase activity, TAS | 1 genes |
| tyrosine transaminase activity, NAS | 1 genes |
| type 1 serine/threonine specific protein phosphatase inhibitor activity, NR | 1 genes |
| thyroid hormone receptor activity, IEA | 1 genes |
| transmembrane receptor activity, IC | 1 genes |
| transmembrane receptor activity, IMP | 1 genes |
| transmembrane receptor activity, NR | 1 genes |
| thromboxane A2 receptor activity, TAS | 1 genes |
| tachykinin receptor activity, IEA | 1 genes |
| thyrotropin-releasing hormone receptor activity, TAS | 1 genes |
| transmembrane receptor protein tyrosine phosphatase activity, ISS | 1 genes |
| transforming growth factor beta receptor activity, NAS | 1 genes |
| type I transforming growth factor beta receptor activity, TAS | 1 genes |
| type II transforming growth factor beta receptor activity, TAS | 1 genes |
| transmembrane receptor protein tyrosine kinase signaling protein activity, TAS | 1 genes |
| transmembrane receptor protein tyrosine kinase adaptor protein activity, NR | 1 genes |
| transmembrane receptor protein tyrosine kinase docking protein activity, TAS | 1 genes |
| transforming growth factor beta receptor, cytoplasmic mediator activity, NR | 1 genes |
| transforming growth factor beta receptor, cytoplasmic mediator activity, TAS | 1 genes |
| tumor necrosis factor receptor binding, IPI | 1 genes |
| tumor necrosis factor receptor binding, TAS | 1 genes |
| transporter activity, IDA | 1 genes |
| transporter activity, ISS | 1 genes |
| taurine:sodium symporter activity, TAS | 1 genes |
| t-SNARE activity, NR | 1 genes |
| t-SNARE activity, TAS | 1 genes |
| transcription factor complex, IDA | 1 genes |
| transcription factor complex, IPI | 1 genes |
| transcription factor complex, NAS | 1 genes |
| transcription factor TFIID complex, NR | 1 genes |
| transcription factor TFIIA complex, NAS | 1 genes |
| transcription factor TFIIA complex, NR | 1 genes |
| transcription factor TFIIE complex, TAS | 1 genes |
| transcription factor TFIIF complex, NR | 1 genes |
| transcription factor TFIIF complex, TAS | 1 genes |
| translocon, NAS | 1 genes |
| troponin complex, NAS | 1 genes |
| troponin complex, TAS | 1 genes |
| tight junction, NAS | 1 genes |
| trehalose catabolism, TAS | 1 genes |
| thioredoxin pathway, ISS | 1 genes |
| thymidine catabolism, NAS | 1 genes |
| transcription-coupled nucleotide-excision repair, NR | 1 genes |
| transcription-coupled nucleotide-excision repair, TAS | 1 genes |
| transcription, NR | 1 genes |
| transcription, DNA-dependent, NR | 1 genes |
| transcription initiation, NAS | 1 genes |
| transcription initiation, NR | 1 genes |
| transcription termination, IEA | 1 genes |
| transcription termination, NAS | 1 genes |
| transcription termination, TAS | 1 genes |
| transcription from Pol II promoter, IDA | 1 genes |
| transcription from Pol II promoter, IEA | 1 genes |
| transcription from Pol II promoter, IMP | 1 genes |
| transcription from Pol II promoter, ISS | 1 genes |
| transcription from Pol II promoter, NAS | 1 genes |
| transcription termination from Pol II promoter, TAS | 1 genes |
| transcription from Pol III promoter, IDA | 1 genes |
| transcription from mitochondrial promoter, TAS | 1 genes |
| tRNA metabolism, IEA | 1 genes |
| tRNA modification, IDA | 1 genes |
| tRNA modification, IEA | 1 genes |
| tRNA modification, TAS | 1 genes |
| tRNA-nucleus export, IEA | 1 genes |
| tRNA aminoacylation for protein translation, TAS | 1 genes |
| tryptophanyl-tRNA aminoacylation, TAS | 1 genes |
| tyrosyl-tRNA aminoacylation, IEA | 1 genes |
| tyrosyl-tRNA aminoacylation, TAS | 1 genes |
| tryptophan metabolism, IEA | 1 genes |
| tryptophan catabolism, NR | 1 genes |
| tryptophan catabolism, TAS | 1 genes |
| tyrosine metabolism, IEA | 1 genes |
| tyrosine catabolism, IEA | 1 genes |
| tyrosine catabolism, NAS | 1 genes |
| thyroid hormone generation, NR | 1 genes |
| triacylglycerol metabolism, IC | 1 genes |
| triacylglycerol metabolism, ISS | 1 genes |
| triacylglycerol metabolism, NAS | 1 genes |
| triacylglycerol metabolism, NR | 1 genes |
| tetrahydrobiopterin biosynthesis, TAS | 1 genes |
| thiamin metabolism, IEA | 1 genes |
| transport, ISS | 1 genes |
| tubulin folding, TAS | 1 genes |
| traversing start control point of mitotic cell cycle, NR | 1 genes |
| transmembrane receptor protein tyrosine kinase signaling pathway, IDA | 1 genes |
| transmembrane receptor protein tyrosine kinase ligand binding, TAS | 1 genes |
| transmembrane receptor protein tyrosine kinase activation (dimerization), IDA | 1 genes |
| transmembrane receptor protein tyrosine kinase activation (dimerization), NAS | 1 genes |
| transmembrane receptor protein tyrosine kinase activation (dimerization), TAS | 1 genes |
| transmembrane receptor protein serine/threonine kinase signaling pathway, ISS | 1 genes |
| transmembrane receptor protein serine/threonine kinase signaling pathway, NAS | 1 genes |
| tachykinin signaling pathway, IEA | 1 genes |
| transcription elongation factor complex, IPI | 1 genes |
| transcription elongation factor complex, NAS | 1 genes |
| thiopurine S-methyltransferase activity, TAS | 1 genes |
| transcription factor binding, IDA | 1 genes |
| transcription factor binding, NAS | 1 genes |
| transcription factor binding, NR | 1 genes |
| translation factor activity, nucleic acid binding, NAS | 1 genes |
| tRNA (guanine-N7-)-methyltransferase activity, IDA | 1 genes |
| tRNA guanylyltransferase activity, TAS | 1 genes |
| tRNA specific adenosine deaminase activity, TAS | 1 genes |
| tocopherol binding, NAS | 1 genes |
| tocopherol binding, TAS | 1 genes |
| thyrotropin-releasing hormone activity, TAS | 1 genes |
| tetracycline transporter activity, TAS | 1 genes |
| translation activator activity, NR | 1 genes |
| thymidine phosphorylase activity, TAS | 1 genes |
| threonine biosynthesis, IEA | 1 genes |
| thiamin diphosphate biosynthesis, IEA | 1 genes |
| translational attenuation, TAS | 1 genes |
| toxin metabolism, ISS | 1 genes |
| trans-Golgi network transport vesicle membrane, IDA | 1 genes |
| thiamin transporter activity, TAS | 1 genes |
| thyroid hormone transporter activity, NR | 1 genes |
| tubulin binding, NAS | 1 genes |
| toxin binding, NAS | 1 genes |
| thiamin transport, NAS | 1 genes |
| tRNA catabolism, IDA | 1 genes |
| translation release factor activity, codon specific, IEA | 1 genes |
| transcriptional repressor activity, IEP | 1 genes |
| transcriptional repressor activity, IMP | 1 genes |
| transferase activity, TAS | 1 genes |
| transferase activity, transferring glycosyl groups, ISS | 1 genes |
| transferase activity, transferring glycosyl groups, NAS | 1 genes |
| transcriptional repressor complex, NAS | 1 genes |
| tubulin-specific chaperone activity, IEA | 1 genes |
| tubulin-specific chaperone activity, TAS | 1 genes |
| tripeptidyl-peptidase I activity, IEA | 1 genes |
| transmission of nerve impulse, NAS | 1 genes |
| triacylglycerol biosynthesis, IDA | 1 genes |
| trans-Golgi network transport vesicle, IDA | 1 genes |
| troponin C binding, NAS | 1 genes |
| T-cell differentiation, IDA | 1 genes |
| T-cell differentiation, ISS | 1 genes |
| trypsin inhibitor activity, IMP | 1 genes |
| trypsin inhibitor activity, NAS | 1 genes |
| trypsin inhibitor activity, TAS | 1 genes |
| translation repressor activity, NAS | 1 genes |
| TPR domain binding, ISS | 1 genes |
| T-helper 1 type immune response, IC | 1 genes |
| T-helper 1 type immune response, IDA | 1 genes |
| T-helper 1 type immune response, NAS | 1 genes |
| T-helper 1 type immune response, TAS | 1 genes |
| T-helper cell differentiation, IDA | 1 genes |
| T-cell proliferation, NAS | 1 genes |
| T-cell receptor complex, TAS | 1 genes |
| T-cell activation, IMP | 1 genes |
| tissue regeneration, IEA | 1 genes |
| tissue regeneration, NAS | 1 genes |
| triacylated lipoprotein binding, ISS | 1 genes |
| T-cell receptor binding, IDA | 1 genes |
| tRNA 3'-processing, IDA | 1 genes |
| TAP complex, ISS | 1 genes |
| tyrosine phosphorylation of JAK2 protein, ISS | 1 genes |
| tyrosine phosphorylation of JAK2 protein, NAS | 1 genes |
| T-cell homeostasis, NAS | 1 genes |
| T-cell selection, NAS | 1 genes |
| T-cell selection, TAS | 1 genes |
| thymic T-cell selection, IDA | 1 genes |
| translation regulator activity, IEA | 1 genes |
| tricarboxylic acid cycle enzyme complex, IEA | 1 genes |
| thymocyte differentiation, ISS | 1 genes |
| tetrahydrofolate metabolism, IEA | 1 genes |
| TAP1 binding, ISS | 1 genes |
| TAP1 binding, TAS | 1 genes |
| TAP2 binding, IPI | 1 genes |
| TAP2 binding, TAS | 1 genes |
| tapasin binding, IPI | 1 genes |
| tapasin binding, ISS | 1 genes |
| tau protein binding, ISS | 1 genes |
| tau protein binding, TAS | 1 genes |
| tau-protein kinase activity, IDA | 1 genes |
| thiamin-triphosphatase activity, IDA | 1 genes |
| testosterone 6-beta-hydroxylase activity, IDA | 1 genes |